RustFungiGenomicsV1, Main, Exploration, bibRecord, 000163

Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.

Identifieur interne : 000163 ( Main/Exploration ); précédent : 000162; suivant : 000164

Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.

Auteurs : Jamie R. Wood [Nouvelle-Zélande] ; Francisca P. Díaz [Chili] ; Claudio Latorre [Chili] ; Janet M. Wilmshurst [Nouvelle-Zélande] ; Olivia R. Burge [Nouvelle-Zélande] ; Rodrigo A. Gutiérrez [Chili]

Source :

Scientific reports [ 2045-2322 ] ; 2018.

RBID : pubmed:30464240

Descripteurs français

KwdFr :
- ADN ancien (isolement et purification), ADN fongique (isolement et purification), ARN ribosomique 18S (génétique), Animaux (MeSH), Champignons (classification), Champignons (génétique), Changement climatique (MeSH), Chili (MeSH), Climat désertique (MeSH), Fossiles (MeSH), Fèces (composition chimique), Maladies des plantes (microbiologie), Métagénomique (méthodes), Rodentia (MeSH).
MESH :
- composition chimique : Champignons, Fèces.
- génétique : ARN ribosomique 18S, Champignons.
- isolement et purification : ADN ancien, ADN fongique.
- microbiologie : Maladies des plantes.
- méthodes : Métagénomique.
- Animaux, Changement climatique, Chili, Climat désertique, Fossiles, Rodentia.
Wicri :
- geographic : Chili.

English descriptors

KwdEn :
- Animals (MeSH), Chile (MeSH), Climate Change (MeSH), DNA, Ancient (isolation & purification), DNA, Fungal (isolation & purification), Desert Climate (MeSH), Feces (chemistry), Fossils (MeSH), Fungi (classification), Fungi (genetics), Metagenomics (methods), Plant Diseases (microbiology), RNA, Ribosomal, 18S (genetics), Rodentia (MeSH).
MESH :
- chemical , genetics : RNA, Ribosomal, 18S.
- chemical , isolation & purification : DNA, Ancient, DNA, Fungal.
- geographic : Chile.
- chemistry : Feces.
- classification : Fungi.
- genetics : Fungi.
- methods : Metagenomics.
- microbiology : Plant Diseases.
- Animals, Climate Change, Desert Climate, Fossils, Rodentia.

Abstract

Future climate change has the potential to alter the distribution and prevalence of plant pathogens, which may have significant implications for both agricultural crops and natural plant communities. However, there are few long-term datasets against which modelled predictions of pathogen responses to climate change can be tested. Here, we use 18S metabarcoding of 28 rodent middens (solidified deposits of rodent coprolites and nesting material) from the Central Atacama, spanning the last ca. 49 ka, to provide the first long-term late Quaternary record of change in plant pathogen communities in response to changing climate. Plant pathogen richness was significantly greater in middens deposited during the Central Andean Pluvial Event (CAPE); a period of increased precipitation between 17.5-8.5 ka. Moreover, the occurrence frequency of Pucciniaceae (rust fungi) was significantly greater during the CAPE, and the highest relative abundances for five additional potentially pathogenic taxa also occurred during this period. The results demonstrate the promising potential for ancient DNA analysis of late Quaternary samples to reveal insights into how plant pathogens responded to past climatic and environmental change, which could help predict how pathogens may responded to future change.

DOI: 10.1038/s41598-018-35299-2
PubMed: 30464240
PubMed Central: PMC6249261

Affiliations:

Chili, Nouvelle-Zélande

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000144
to stream Main, to step Curation: 000144

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.</title>
<author><name sortKey="Wood, Jamie R" sort="Wood, Jamie R" uniqKey="Wood J" first="Jamie R" last="Wood">Jamie R. Wood</name>
<affiliation wicri:level="1"><nlm:affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand. woodj@landcareresearch.co.nz.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640</wicri:regionArea>
<wicri:noRegion>7640</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Diaz, Francisca P" sort="Diaz, Francisca P" uniqKey="Diaz F" first="Francisca P" last="Díaz">Francisca P. Díaz</name>
<affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago, Chile. fpdiaz@uc.cl.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago, Chile. fpdiaz@uc.cl.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Latorre, Claudio" sort="Latorre, Claudio" uniqKey="Latorre C" first="Claudio" last="Latorre">Claudio Latorre</name>
<affiliation wicri:level="1"><nlm:affiliation>Departamento de Ecología, Pontificia Universidad Católica de Chile, Alameda, 340, Santiago, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Departamento de Ecología, Pontificia Universidad Católica de Chile, Alameda, 340, Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Institute of Ecology and Biodiversity (IEB), Las Palmeras, 3425, Ñuñoa, Santiago, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Institute of Ecology and Biodiversity (IEB), Las Palmeras, 3425, Ñuñoa, Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Wilmshurst, Janet M" sort="Wilmshurst, Janet M" uniqKey="Wilmshurst J" first="Janet M" last="Wilmshurst">Janet M. Wilmshurst</name>
<affiliation wicri:level="1"><nlm:affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640</wicri:regionArea>
<wicri:noRegion>7640</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>School of Environment, The University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>School of Environment, The University of Auckland, Private Bag 92019, Auckland, 1142</wicri:regionArea>
<wicri:noRegion>1142</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Burge, Olivia R" sort="Burge, Olivia R" uniqKey="Burge O" first="Olivia R" last="Burge">Olivia R. Burge</name>
<affiliation wicri:level="1"><nlm:affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640</wicri:regionArea>
<wicri:noRegion>7640</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gutierrez, Rodrigo A" sort="Gutierrez, Rodrigo A" uniqKey="Gutierrez R" first="Rodrigo A" last="Gutiérrez">Rodrigo A. Gutiérrez</name>
<affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2018">2018</date>
<idno type="RBID">pubmed:30464240</idno>
<idno type="pmid">30464240</idno>
<idno type="doi">10.1038/s41598-018-35299-2</idno>
<idno type="pmc">PMC6249261</idno>
<idno type="wicri:Area/Main/Corpus">000144</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000144</idno>
<idno type="wicri:Area/Main/Curation">000144</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000144</idno>
<idno type="wicri:Area/Main/Exploration">000144</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.</title>
<author><name sortKey="Wood, Jamie R" sort="Wood, Jamie R" uniqKey="Wood J" first="Jamie R" last="Wood">Jamie R. Wood</name>
<affiliation wicri:level="1"><nlm:affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand. woodj@landcareresearch.co.nz.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640</wicri:regionArea>
<wicri:noRegion>7640</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Diaz, Francisca P" sort="Diaz, Francisca P" uniqKey="Diaz F" first="Francisca P" last="Díaz">Francisca P. Díaz</name>
<affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago, Chile. fpdiaz@uc.cl.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago, Chile. fpdiaz@uc.cl.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Latorre, Claudio" sort="Latorre, Claudio" uniqKey="Latorre C" first="Claudio" last="Latorre">Claudio Latorre</name>
<affiliation wicri:level="1"><nlm:affiliation>Departamento de Ecología, Pontificia Universidad Católica de Chile, Alameda, 340, Santiago, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Departamento de Ecología, Pontificia Universidad Católica de Chile, Alameda, 340, Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Institute of Ecology and Biodiversity (IEB), Las Palmeras, 3425, Ñuñoa, Santiago, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Institute of Ecology and Biodiversity (IEB), Las Palmeras, 3425, Ñuñoa, Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Wilmshurst, Janet M" sort="Wilmshurst, Janet M" uniqKey="Wilmshurst J" first="Janet M" last="Wilmshurst">Janet M. Wilmshurst</name>
<affiliation wicri:level="1"><nlm:affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640</wicri:regionArea>
<wicri:noRegion>7640</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>School of Environment, The University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>School of Environment, The University of Auckland, Private Bag 92019, Auckland, 1142</wicri:regionArea>
<wicri:noRegion>1142</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Burge, Olivia R" sort="Burge, Olivia R" uniqKey="Burge O" first="Olivia R" last="Burge">Olivia R. Burge</name>
<affiliation wicri:level="1"><nlm:affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand.</nlm:affiliation>
<country xml:lang="fr">Nouvelle-Zélande</country>
<wicri:regionArea>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640</wicri:regionArea>
<wicri:noRegion>7640</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gutierrez, Rodrigo A" sort="Gutierrez, Rodrigo A" uniqKey="Gutierrez R" first="Rodrigo A" last="Gutiérrez">Rodrigo A. Gutiérrez</name>
<affiliation wicri:level="1"><nlm:affiliation>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago</wicri:regionArea>
<wicri:noRegion>Santiago</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series><title level="j">Scientific reports</title>
<idno type="eISSN">2045-2322</idno>
<imprint><date when="2018" type="published">2018</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term>
<term>Chile (MeSH)</term>
<term>Climate Change (MeSH)</term>
<term>DNA, Ancient (isolation & purification)</term>
<term>DNA, Fungal (isolation & purification)</term>
<term>Desert Climate (MeSH)</term>
<term>Feces (chemistry)</term>
<term>Fossils (MeSH)</term>
<term>Fungi (classification)</term>
<term>Fungi (genetics)</term>
<term>Metagenomics (methods)</term>
<term>Plant Diseases (microbiology)</term>
<term>RNA, Ribosomal, 18S (genetics)</term>
<term>Rodentia (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN ancien (isolement et purification)</term>
<term>ADN fongique (isolement et purification)</term>
<term>ARN ribosomique 18S (génétique)</term>
<term>Animaux (MeSH)</term>
<term>Champignons (classification)</term>
<term>Champignons (génétique)</term>
<term>Changement climatique (MeSH)</term>
<term>Chili (MeSH)</term>
<term>Climat désertique (MeSH)</term>
<term>Fossiles (MeSH)</term>
<term>Fèces (composition chimique)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Métagénomique (méthodes)</term>
<term>Rodentia (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>RNA, Ribosomal, 18S</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="isolation & purification" xml:lang="en"><term>DNA, Ancient</term>
<term>DNA, Fungal</term>
</keywords>
<keywords scheme="MESH" type="geographic" xml:lang="en"><term>Chile</term>
</keywords>
<keywords scheme="MESH" qualifier="chemistry" xml:lang="en"><term>Feces</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Fungi</term>
</keywords>
<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Champignons</term>
<term>Fèces</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Fungi</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ARN ribosomique 18S</term>
<term>Champignons</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>ADN ancien</term>
<term>ADN fongique</term>
</keywords>
<keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>Metagenomics</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Maladies des plantes</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Plant Diseases</term>
</keywords>
<keywords scheme="MESH" qualifier="méthodes" xml:lang="fr"><term>Métagénomique</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Climate Change</term>
<term>Desert Climate</term>
<term>Fossils</term>
<term>Rodentia</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Animaux</term>
<term>Changement climatique</term>
<term>Chili</term>
<term>Climat désertique</term>
<term>Fossiles</term>
<term>Rodentia</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Chili</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Future climate change has the potential to alter the distribution and prevalence of plant pathogens, which may have significant implications for both agricultural crops and natural plant communities. However, there are few long-term datasets against which modelled predictions of pathogen responses to climate change can be tested. Here, we use 18S metabarcoding of 28 rodent middens (solidified deposits of rodent coprolites and nesting material) from the Central Atacama, spanning the last ca. 49 ka, to provide the first long-term late Quaternary record of change in plant pathogen communities in response to changing climate. Plant pathogen richness was significantly greater in middens deposited during the Central Andean Pluvial Event (CAPE); a period of increased precipitation between 17.5-8.5 ka. Moreover, the occurrence frequency of Pucciniaceae (rust fungi) was significantly greater during the CAPE, and the highest relative abundances for five additional potentially pathogenic taxa also occurred during this period. The results demonstrate the promising potential for ancient DNA analysis of late Quaternary samples to reveal insights into how plant pathogens responded to past climatic and environmental change, which could help predict how pathogens may responded to future change.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">30464240</PMID>
<DateCompleted><Year>2019</Year>
<Month>11</Month>
<Day>04</Day>
</DateCompleted>
<DateRevised><Year>2019</Year>
<Month>11</Month>
<Day>21</Day>
</DateRevised>
<Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2045-2322</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>8</Volume>
<Issue>1</Issue>
<PubDate><Year>2018</Year>
<Month>11</Month>
<Day>21</Day>
</PubDate>
</JournalIssue>
<Title>Scientific reports</Title>
<ISOAbbreviation>Sci Rep</ISOAbbreviation>
</Journal>
<ArticleTitle>Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.</ArticleTitle>
<Pagination><MedlinePgn>17208</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1038/s41598-018-35299-2</ELocationID>
<Abstract><AbstractText>Future climate change has the potential to alter the distribution and prevalence of plant pathogens, which may have significant implications for both agricultural crops and natural plant communities. However, there are few long-term datasets against which modelled predictions of pathogen responses to climate change can be tested. Here, we use 18S metabarcoding of 28 rodent middens (solidified deposits of rodent coprolites and nesting material) from the Central Atacama, spanning the last ca. 49 ka, to provide the first long-term late Quaternary record of change in plant pathogen communities in response to changing climate. Plant pathogen richness was significantly greater in middens deposited during the Central Andean Pluvial Event (CAPE); a period of increased precipitation between 17.5-8.5 ka. Moreover, the occurrence frequency of Pucciniaceae (rust fungi) was significantly greater during the CAPE, and the highest relative abundances for five additional potentially pathogenic taxa also occurred during this period. The results demonstrate the promising potential for ancient DNA analysis of late Quaternary samples to reveal insights into how plant pathogens responded to past climatic and environmental change, which could help predict how pathogens may responded to future change.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Wood</LastName>
<ForeName>Jamie R</ForeName>
<Initials>JR</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0001-8008-6083</Identifier>
<AffiliationInfo><Affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand. woodj@landcareresearch.co.nz.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Díaz</LastName>
<ForeName>Francisca P</ForeName>
<Initials>FP</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-1100-7801</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago, Chile. fpdiaz@uc.cl.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago, Chile. fpdiaz@uc.cl.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Latorre</LastName>
<ForeName>Claudio</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>Departamento de Ecología, Pontificia Universidad Católica de Chile, Alameda, 340, Santiago, Chile.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Institute of Ecology and Biodiversity (IEB), Las Palmeras, 3425, Ñuñoa, Santiago, Chile.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Wilmshurst</LastName>
<ForeName>Janet M</ForeName>
<Initials>JM</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-4474-8569</Identifier>
<AffiliationInfo><Affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>School of Environment, The University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Burge</LastName>
<ForeName>Olivia R</ForeName>
<Initials>OR</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0001-7719-6695</Identifier>
<AffiliationInfo><Affiliation>Manaaki Whenua Landcare Research, PO Box 69040, Lincoln, 7640, New Zealand.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Gutiérrez</LastName>
<ForeName>Rodrigo A</ForeName>
<Initials>RA</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0002-5961-5005</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile, Avda. Libertador Bernardo O'Higgins 340, Santiago, Chile.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>FONDAP Center for Genome Regulation & Millennium Institute for Integrative Biology (iBio), Santiago, Chile.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<GrantList CompleteYN="Y"><Grant><GrantID>Core funding for Crown Research Institutes</GrantID>
<Agency>Ministry of Business, Innovation and Employment (MBIE)</Agency>
<Country>International</Country>
</Grant>
<Grant><GrantID>Core funding to Crown Research Institutes</GrantID>
<Agency>Ministry for Business Innovation and Employment (MBIE)</Agency>
<Country>International</Country>
</Grant>
</GrantList>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2018</Year>
<Month>11</Month>
<Day>21</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>England</Country>
<MedlineTA>Sci Rep</MedlineTA>
<NlmUniqueID>101563288</NlmUniqueID>
<ISSNLinking>2045-2322</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D000072441">DNA, Ancient</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance>
</Chemical>
<Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D012337">RNA, Ribosomal, 18S</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D002677" MajorTopicYN="N" Type="Geographic">Chile</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D057231" MajorTopicYN="Y">Climate Change</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D000072441" MajorTopicYN="N">DNA, Ancient</DescriptorName>
<QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName>
<QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D003889" MajorTopicYN="N">Desert Climate</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005243" MajorTopicYN="N">Feces</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005580" MajorTopicYN="Y">Fossils</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005658" MajorTopicYN="N">Fungi</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D056186" MajorTopicYN="N">Metagenomics</DescriptorName>
<QualifierName UI="Q000379" MajorTopicYN="N">methods</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012337" MajorTopicYN="N">RNA, Ribosomal, 18S</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012377" MajorTopicYN="N">Rodentia</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2018</Year>
<Month>05</Month>
<Day>23</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2018</Year>
<Month>11</Month>
<Day>01</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2018</Year>
<Month>11</Month>
<Day>23</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed"><Year>2018</Year>
<Month>11</Month>
<Day>23</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline"><Year>2019</Year>
<Month>11</Month>
<Day>5</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>epublish</PublicationStatus>
<ArticleIdList><ArticleId IdType="pubmed">30464240</ArticleId>
<ArticleId IdType="doi">10.1038/s41598-018-35299-2</ArticleId>
<ArticleId IdType="pii">10.1038/s41598-018-35299-2</ArticleId>
<ArticleId IdType="pmc">PMC6249261</ArticleId>
</ArticleIdList>
<ReferenceList><Reference><Citation>Science. 2004 Nov 26;306(5701):1561-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15567864</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2016 Feb;209(3):1149-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26459939</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Hum Evol. 2015 Feb;79:137-49</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25532802</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Microbes Infect. 2002 Nov;4(13):1369-77</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12443902</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Commun. 2014;5:3211</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24487920</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Phytopathol. 2006;44:489-509</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16722808</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2005 Apr 12;102(15):5438-42</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15809418</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mycol Res. 2007 Feb;111(Pt 2):163-75</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17324755</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Ecol Evol. 2011 May;26(5):249-59</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21474198</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2014 Feb;201(3):770-80</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24558651</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Opin Plant Biol. 2016 Aug;32:101-109</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27471781</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Proc Natl Acad Sci U S A. 2018 Mar 13;115(11):2670-2675</Citation>
<ArticleIdList><ArticleId IdType="pubmed">29483268</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2016 Jul 8;353(6295):169-72</Citation>
<ArticleIdList><ArticleId IdType="pubmed">27387951</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2013;8(2):e57315</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23451203</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Genome Res. 2007 Mar;17(3):377-86</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17255551</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2015 Nov 1;31(21):3476-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26139637</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mycol Res. 2004 May;108(Pt 5):471-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15229999</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Philos Trans R Soc Lond B Biol Sci. 2016 Dec 05;371(1709):null</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28080981</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mycol Res. 2008 Dec;112(Pt 12):1387-408</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18675350</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Glob Chang Biol. 2014 Dec;20(12):3621-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24687916</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2017 May;214(3):924-942</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28370025</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS Pathog. 2014 Apr 24;10(4):e1004028</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24763501</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Glob Chang Biol. 2013 Jul;19(7):1985-2000</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23554235</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2017 May 12;356(6338):605-608</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28450384</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2001 Jun 7;411(6838):695-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11395772</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nat Commun. 2013;4:2172</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23863894</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2003 Apr 18;300(5618):480-2</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12663815</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2000 Sep 1;289(5484):1542-1546</Citation>
<ArticleIdList><ArticleId IdType="pubmed">10968788</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2013 Aug 2;341(6145):499-504</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23908227</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
<affiliations><list><country><li>Chili</li>
<li>Nouvelle-Zélande</li>
</country>
</list>
<tree><country name="Nouvelle-Zélande"><noRegion><name sortKey="Wood, Jamie R" sort="Wood, Jamie R" uniqKey="Wood J" first="Jamie R" last="Wood">Jamie R. Wood</name>
</noRegion>
<name sortKey="Burge, Olivia R" sort="Burge, Olivia R" uniqKey="Burge O" first="Olivia R" last="Burge">Olivia R. Burge</name>
<name sortKey="Wilmshurst, Janet M" sort="Wilmshurst, Janet M" uniqKey="Wilmshurst J" first="Janet M" last="Wilmshurst">Janet M. Wilmshurst</name>
<name sortKey="Wilmshurst, Janet M" sort="Wilmshurst, Janet M" uniqKey="Wilmshurst J" first="Janet M" last="Wilmshurst">Janet M. Wilmshurst</name>
</country>
<country name="Chili"><noRegion><name sortKey="Diaz, Francisca P" sort="Diaz, Francisca P" uniqKey="Diaz F" first="Francisca P" last="Díaz">Francisca P. Díaz</name>
</noRegion>
<name sortKey="Diaz, Francisca P" sort="Diaz, Francisca P" uniqKey="Diaz F" first="Francisca P" last="Díaz">Francisca P. Díaz</name>
<name sortKey="Gutierrez, Rodrigo A" sort="Gutierrez, Rodrigo A" uniqKey="Gutierrez R" first="Rodrigo A" last="Gutiérrez">Rodrigo A. Gutiérrez</name>
<name sortKey="Gutierrez, Rodrigo A" sort="Gutierrez, Rodrigo A" uniqKey="Gutierrez R" first="Rodrigo A" last="Gutiérrez">Rodrigo A. Gutiérrez</name>
<name sortKey="Latorre, Claudio" sort="Latorre, Claudio" uniqKey="Latorre C" first="Claudio" last="Latorre">Claudio Latorre</name>
<name sortKey="Latorre, Claudio" sort="Latorre, Claudio" uniqKey="Latorre C" first="Claudio" last="Latorre">Claudio Latorre</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/RustFungiGenomicsV1/Data/Main/Exploration

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000163 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000163 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    RustFungiGenomicsV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:30464240
   |texte=   Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:30464240" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a RustFungiGenomicsV1

This area was generated with Dilib version V0.6.38.
Data generation: Fri Nov 20 18:06:51 2020. Site generation: Fri Nov 20 18:08:25 2020

	Serveur d'exploration sur la génomique des pucciniales
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur la génomique des pucciniales

Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.

Plant pathogen responses to Late Pleistocene and Holocene climate change in the central Atacama Desert, Chile.

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri

Pour générer des pages wiki